Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNYHVKFLNEKDVELAEAVCAASEDY--YLIEQ--DKSASKSDALKIITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIG--LLLLTPDARHNGLGKVLHQTIKEWASDGG-ADSLALGVLAENEKGRGFFEHLGYTKEETKQA--S-YGGKEQEVSIFTLAIK
2I79 Chain:A ((1-171))
MEYELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQAS---SDNQITLLAF-LNGKIAGIVNITADQR-KRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLI-
General information:
TITO was launched using:
RESULT:
Template:
2I79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62390 for 1131 contacts (-55.2/contact) +
2D Compatibility (PS) -17238 + (NN) -5010 + (LL) 32
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -90656.0 ( -80.16 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2I79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I79-query.scw
PDB file :
Tito_Scwrl_2I79.pdb
: