Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAYVIALAIDGKMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLK-RSNERISFGRLTLPH-QLMRLVLVEQVYRAFRIVRGEPYHK
3IEF Chain:A ((79-153))
---------------------------------------------------------------------DSPRLLMSPRGRLLNQ-AYARSLAR-----SSGVTLVCGRFEGVDERIIEARELEEVSIGDYILSGGETAALVLLDAIVRL-----------
General information:
TITO was launched using:
RESULT:
Template:
3IEF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43491 for 457 contacts (-95.2/contact) +
2D Compatibility (PS) -8227 + (NN) -5736 + (LL) 7288
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -57566.0 ( -125.96 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_3IEF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEF-query.scw
PDB file :
Tito_Scwrl_3IEF.pdb
: