Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKANPILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
1XD7 Chain:A ((6-132))
----------SRLAVAIHILSLISMDEKT---SSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASLKKDPADISLLEVYRAVQKN-----------PKCPVGKKIQNALDETFESVQRAMENELASKSLKDVMN---------------------
General information:
TITO was launched using:
RESULT:
Template:
1XD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47057 for 766 contacts (-61.4/contact) +
2D Compatibility (PS) -12466 + (NN) -5564 + (LL) 2704
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -75233.0 ( -98.22 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1XD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XD7-query.scw
PDB file :
Tito_Scwrl_1XD7.pdb
: