Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAP-----------GNRQVEHENVINAAKKAGVSYIAYTSFAGAD-KS-----------------TSALAEDHFFTEKVIEK----SGIAHTFLRNNWYFENEMP----MIGGALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAGAGFPEILELSGPLMTYEELTKALKEATGKDFDVISSDDKGFV------ENLV-SVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 3WJ7 Chain:A ((14-332)) | DVTLVTGATGFVGSAVARVLEERG--HRLRLLVRPTSDRSNIAELNAELAVGDLSDPDTLAPALKGVKILFHVAADYRLWVPDPETMMKANVEGTRNLMLAALEAGVEKIIYCSSVAALGLRSDGVPADETTPVSESQVIGIYKLSKYRAEQEVLRLIREKNLPAIIVNPSTPVGPRDIKPTPTGQMILDCASGNMPAYVETGLNIVHVDDVAEGHALALERGKIGEKYILGGENIMLGDLFRMVSQIAGVKPPAVKLKQSWLYPVALVSEWLARGFGIEPRVTRETLA---M-SKKLMFFSSDKAKKELGYAPRPARDAVTDAI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90448 for 2223 contacts (-40.7/contact) +
2D Compatibility (PS) -29846 + (NN) -18224 + (LL) 632
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -149436.0 ( -67.22 by residue)
QMean score : 0.495
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