Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDLFEA--DLPYYDVTM------MSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNFSIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSLNYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF
2HPV Chain:A ((2-208))-SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGA--AFE-TLSENQQQKVARFNELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYE-----GKDFASQYIKAILNFIGVDQVDGLFIEGIDHFPDRAEELLNTAMTKATEYGKTF


General information:
TITO was launched using:
RESULT:

Template: 2HPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119137 for 1513 contacts (-78.7/contact) +
2D Compatibility (PS) -21506 + (NN) -10184 + (LL) 420
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -166107.0 ( -109.79 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_2HPV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HPV-query.scw
PDB file : Tito_Scwrl_2HPV.pdb: