Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER |
| 1SQU Chain:A ((3-118)) | ------------------------------------------------------ARIVNALIGSVYETIRDVLGIEPKTGKPSTVS-HI-------EIPHSLVT-VIGITGGIEGSLIYSFSSETALKVVSAMMGGMEY------NQLDELALSAIGELGNMTAGKLAMKLEH-LGKHVDITPPTV------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60347 for 761 contacts (-79.3/contact) +
2D Compatibility (PS) -12619 + (NN) -6727 + (LL) 16108
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -66685.0 ( -87.63 by residue)
QMean score : 0.431
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