Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNWYKKYREEKRDYKQYKKRIAALPE------DYKTAMKAIETYLWNFAKGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNL--LSEFPEETWMDKQRQKLRDSIK
2KAU Chain:A ((1-100))
---MELTPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARDG------KSVASLMEEGRH--VLTREQVMEGVPEMIPDIQVEATFPD----GSKLVTVHNPII
General information:
TITO was launched using:
RESULT:
Template:
2KAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11304 for 596 contacts (19.0/contact) +
2D Compatibility (PS) -9663 + (NN) -1305 + (LL) 1276
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -3488.0 ( -5.85 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_2KAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KAU-query.scw
PDB file :
Tito_Scwrl_2KAU.pdb
: