Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQTVQTKE-GKKKITYSMHSVIITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
| 2BDZ Chain:A ((117-179)) | -----------------------------------------------------------------------------------------------------------------------------------------------------DEISLIQAIAN-QPVSVVTDSRGRG---FQFYKGGIYEGPCGTNTDHAVTAVGYGKTYLLLKNSWGP--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33537 for 311 contacts (-107.8/contact) +
2D Compatibility (PS) -6661 + (NN) -1653 + (LL) 10696
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -33705.0 ( -108.38 by residue)
QMean score : 0.456
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