Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------LDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSYFHS-KQIGKTARLV---------RQIRDLELIIT----TSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIE--VVFEVKRDGAHYFGPY----------------------------PGRFSARQTVDLIEKLF-------PLCRCDGKPGRPCLYYHLGLCLGPCQAEIEPAVYKKQIHKISR--------------FLEGDVKNVKDKLLGDM---------LTATENLEFERAAELRDK----IHAINETIEKQHIIFPGLKNRDIIGCYEQDNYLSVFVFFVRNGAINGSKWHVFQVEKTLQEEL----ATFLNQFYEDP-----NNIQPKELLIAEKID----------KSLLNEPLRKACLFPQKGSKKKQVDLAIENAKS---AYIAYAKMKEYDFEIQLNNH------------------------- |
| 4IWS Chain:A ((23-515)) | MNRSALDFRHFVDHLRRQGDLVDVHTEV----DANLEIGAITRRVYERRAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAMRAEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFGTYGFHVVQTPDGSWDSWSVGRLMLVDRNTLAGPTIPTQHIGIIREQWRRLGKPTPWAMALGAPPAALAAAGMPLPEGVSEAGYVGALVGEPV-EVVRTQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAG-LPVDMVWC--SYEAATCWAVLSIDVQRLAALGTDAAAFAARVAETVFGSHAGHLVPKLILVGNDIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23650 for 2557 contacts (-9.2/contact) +
2D Compatibility (PS) -37117 + (NN) -7354 + (LL) 644
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -83477.0 ( -32.65 by residue)
QMean score : 0.120
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