Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWRE------KPNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVASGEMEHV--YDRNQSGLEQALEDIASFCRKERDVFLVGEISSDKLPEIARYS--SKKMLDVTFNFNFGSVDQ-------------LDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIVKTQL---LAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQAL--QTGTDEKQALEIAIEKTRDKARGPMIFPDGKP--FTLGEPWIKMATLPE--------EEARMMWDFYQALLAFRKENDFKEMEYTFLKL----DGEVLSY---QRGE-FIFLLHFGEEEITYPLQGNYQLVFGEAMMVENGIRMGAHTGIALRVEE |
| 4M56 Chain:A ((3-518)) | -EWWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSAWTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDVIGSISKYTDFPDYET---RSYIVGRYHSNGPRLHEFIQEMNREVLSHYDCMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDLIALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDRKLRKECAKAFATVLHGMKGTPFIYQGEEIGMVNSDM-PLEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHAGFTAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQ--YKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEK------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166560 for 3945 contacts (-42.2/contact) +
2D Compatibility (PS) -51066 + (NN) -31573 + (LL) 2868
1D Compatibility (HY) -42400 + (ID) 9300
Total energy: -298031.0 ( -75.55 by residue)
QMean score : 0.436
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