Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MKNILLICGSGAS--------------SGFMAAAIRKAAKKRGEQVTVKAAS-ESQIDERINEIDY----LLIGP-HLAYMLDDLKQKVA------------------DKDVLVSIIPQATYGTLNG------EKALDLILNMEG
1D0I Chain:A ((1-150))
PRSLANAPIMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG
General information:
TITO was launched using:
RESULT:
Template:
1D0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54634 for 686 contacts (-79.6/contact) +
2D Compatibility (PS) -10868 + (NN) -5531 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -75983.0 ( -110.76 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1D0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D0I-query.scw
PDB file :
Tito_Scwrl_1D0I.pdb
: