Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLF-LHYVDIIICAKANGEIELIKK
4X84 Chain:A ((35-225))
--------------------IVGVGTGSTANFFIDALAR--HKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVYR-----EGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADG-------
General information:
TITO was launched using:
RESULT:
Template:
4X84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65943 for 1609 contacts (-41.0/contact) +
2D Compatibility (PS) -20744 + (NN) -6803 + (LL) 2888
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -108502.0 ( -67.43 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_4X84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X84-query.scw
PDB file :
Tito_Scwrl_4X84.pdb
: