Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIENEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPT--DNVEKIIE------EILHLNIDYMIHEDFGYYSYPEHYRF-GDIMVMVSYDITK--GVLLELKGKGCRQYENFLLAQHRSWYDFFTDCL-EVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLA-YRNAEKTAFEIINRYIRFAD-KDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV |
| 4CIJ Chain:A ((3-269)) | ---------------------------------------------------------------MSGLKPCVDWLQVTFKTGQDSVKKCVEKLEKVFEILGLNEAEFLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEMTGQGCRLFELHT---SINWYELFYRLVYEYEVNITRLDVAVDDFKGYFKINTLVKKLKDDEVTS---RFKKARHIENIVIEGGETIGHTLYFGAPSSDIQVRFYEKNVQMGM-------DIDVWNRTEIQLRDDRAHVVAQIIADDVLPLGEIVAGLLRNYIQFRTRKATDKNKKRWPLARFWLNFLGDVQ----------PLRIAKQM------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108920 for 1870 contacts (-58.2/contact) +
2D Compatibility (PS) -26684 + (NN) -2724 + (LL) 11640
1D Compatibility (HY) -19200 + (ID) 3900
Total energy: -149788.0 ( -80.10 by residue)
QMean score : 0.306
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