Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKMPEMLSFISEEAVSRKMTSEEIAAHFGYDKHHFSRKFKEIN----------GF------------SVVEFLSSLKVEKA-------IIELDE--EVRILDLQEHSGFESSG----SFTNTFKKYTGSSPRKYKTEMNDIFYDMKRFENDNKDK-----------------SIAHFQENNDSFCNVTIDVPDE------FEKGIIFIGLFRTLIPNHMPIS------GLATKNLIGNQLKNIPSGDYYLLACAISQSNNILSYFN-LSNSLRGKEDEKLSFPKCSGNHYAIK----------------LRK-PIPEDP---PILANVGKILISCLKNTI--------- |
| 3J6V Chain:E ((89-430)) | FFTKLT------ADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIGEGRRGFLWPGLNAPLMKSGAIQTITQRSKEEQEKVEADMVQQREEWDRKRKMKVKRERGWSGNSWGGISLGPPDPGPNGETYDDFDTRILEVRNVFNMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATERADAFRKAKNRAVHYLHYIERYEDHTIYHDISLTFKRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDMY---AKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALRKDPEPEDEVPDIKLDWDDVKAVQGMKRSVWSGLKRAAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25797 for 1516 contacts (17.0/contact) +
2D Compatibility (PS) -25390 + (NN) -940 + (LL) 1292
1D Compatibility (HY) -2400 + (ID) 2500
Total energy: -4141.0 ( -2.73 by residue)
QMean score : 0.123
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