Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASG----------------------------AIPPGTVGNNK---KVVANVIESAGMEALYTIDEPTAAAAVLDL-----QNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVP-VEEAEQ-----------NKRAQK-----------------------------------DSSEHFSVM-----RPVVEKMAEITRVHLEKS---PSEPLYIVGGASAYSQFKDTFESYLK-MP-------VFQPNYPQYVTPLGIAMSSGSENL |
| 2D0O Chain:A ((303-605)) | -------------------------------------------------------------------------TNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHKE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66456 for 1416 contacts (-46.9/contact) +
2D Compatibility (PS) -22398 + (NN) -12425 + (LL) 5808
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -99721.0 ( -70.42 by residue)
QMean score : 0.377
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