Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVT----------YIKLIKELIKDKE---VVKTGMRRE-IDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMH-DFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTVVIVGNKETYVKNGKMITPRGYSL
2E0N Chain:A ((6-237))
SIISVSLGPGDPGLITVKALSQLREADVIYYPGTVSASGAVTSVALDILKEFDLDPSKLRGMLVPMS--YAANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRD--GLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVLAQID-EIGELERAL----VTHSTVVVMKLS-----TVRDELVSFLERY-A--KPFLYAEKVGMAGEFITM-EVDALRSRAIPYFSLLVCSPHCR---------------
General information:
TITO was launched using:
RESULT:
Template:
2E0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169649 for 1645 contacts (-103.1/contact) +
2D Compatibility (PS) -23793 + (NN) -14783 + (LL) 1048
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -219477.0 ( -133.42 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2E0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E0N-query.scw
PDB file :
Tito_Scwrl_2E0N.pdb
: