Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQLKMLKALTDAKGIPGNERAVRNVFREYIEPLADSFETDGLGSAVAKKVGAEDGPKIMIAGHLDEVGFMVTQIDDKGFIKFQTVGGWVSQVMLAQKVTIVTRSGEEITGVIGSKPPHVMTAADRQKS-FDIKDMFIDVGAVDKAEVESYGIRPGDMIVPAFDFTVMKNEKFLLAKAWDNRIGLAIAIEVLKNLQKEQHPNIVYGVGTVQEEVGLRGAKTAAHFVQPDIGFAVDVGIAGDTPGVTDKEAMSKMGEGPQIVIYDASMVAHAGLRDFVTDVADELSIPYQFEAIPMGGTDSGSIHLTGNGIPSLSITIATRYIHSHSSMLHRDDFENAVKLITEVVKRLDKEKVTEIRLG |
| 2WYR Chain:D ((2-325)) | -MSMIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGEGEE--RILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGI-LDGVIGATPPHL--S------VIPWYDLVIDIGAESKEEALEL-VKPLDFAVFKKHFSVL-NGKYVSTRGLDDRFGVVALIEAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAID-SFACCSPLTGD----VKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQI-GVTGGGTDASAFQ---DRSKTLALSVPIKYLHSEVETLHLNDLEKLVKLI------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167857 for 2750 contacts (-61.0/contact) +
2D Compatibility (PS) -34089 + (NN) -11499 + (LL) 3012
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -240583.0 ( -87.48 by residue)
QMean score : 0.527
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