Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCG------------------Y-RL-TTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVVADPTWD--------AP-----RTDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 3RI6 Chain:A ((60-356)) | ----------------------------------------------------------TVEDLEQRLKNLTGALGVLA---LGSGMAAISTAILTLARAGDSVVT-TDRLFGHTLSLF------QKTLPSFGIEVRFVDV-----MDSLAVEHACDETTKLLFLETI----SNPQLQVADLEALSKVVHAK--GIPLVVDTTMTPPYL-LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGL-FEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGP--SLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLI----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142863 for 1988 contacts (-71.9/contact) +
2D Compatibility (PS) -27443 + (NN) -13969 + (LL) 9552
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -185923.0 ( -93.52 by residue)
QMean score : 0.323
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