Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLFRQDENILNSELAEDLPI-PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL
2E99 Chain:B ((17-243))
-----------------------GCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRF---
General information:
TITO was launched using:
RESULT:
Template:
2E99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97782 for 1613 contacts (-60.6/contact) +
2D Compatibility (PS) -23690 + (NN) -10325 + (LL) 2216
1D Compatibility (HY) -13600 + (ID) 5100
Total energy: -148281.0 ( -91.93 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2E99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E99-query.scw
PDB file :
Tito_Scwrl_2E99.pdb
: