Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHV-----TSYEPIDGRKMWEGTLV---SYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF----
4KTW Chain:A ((1-160))
MKKIL-----AINFSTASKKGEGTGYAFRKDGQVYVGSIKAYNPKKTAWERTFDIVNAIKDIIDEFDL--KGYHLAIETPIMGRNRKHSITLANCNGYFIGAIDGLVNGYTFIDNSKWCSYHLISGKREQRKEESLELLKATGLVDSNCKDDNIADAYNILTYCEHL
General information:
TITO was launched using:
RESULT:
Template:
4KTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31115 for 1106 contacts (-28.1/contact) +
2D Compatibility (PS) -15944 + (NN) -6361 + (LL) 920
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -58700.0 ( -53.07 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_4KTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KTW-query.scw
PDB file :
Tito_Scwrl_4KTW.pdb
: