Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSAGKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYRMDPTVPLVVPEVN--EKALFSHNGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAVSGSGVSAIQELKDGSKAVLDNK----------EFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDY--TYEEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNALKNAPGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRAD--IDDPKGFHMWIVSDNLLKGAAWNSIQIAESLVKLAII |
| 3VOS Chain:A ((18-358)) | --TGLSIGIVGATGQVGQVMRTLLDER-DFPASAVRFFASAR----KLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVA------PIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEF-AQPLSPERARELLDGATGVQLVD------VPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147916 for 2846 contacts (-52.0/contact) +
2D Compatibility (PS) -34254 + (NN) -12798 + (LL) 1496
1D Compatibility (HY) -22800 + (ID) 7050
Total energy: -223322.0 ( -78.47 by residue)
QMean score : 0.554
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