Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---M-KITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVES-MEDEEAAQRELWTR-MRNAVRDVLDQTTLADLLKHSTDSELTDGYM-FYI
3LWF Chain:A ((16-159))
YFQGMKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEE-AAQRELWTRMR-NAVRDVLDQTTLSDLLKHSTDSE-LTDGYMFYI
General information:
TITO was launched using:
RESULT:
Template:
3LWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75119 for 887 contacts (-84.7/contact) +
2D Compatibility (PS) -14772 + (NN) -6047 + (LL) 380
1D Compatibility (HY) -15200 + (ID) 6300
Total energy: -117058.0 ( -131.97 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_3LWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWF-query.scw
PDB file :
Tito_Scwrl_3LWF.pdb
: