Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQKIQVENGVLKTPNNPVIPFIEGDGTGPDIWAAAKRVLDAAVKKAYNGEKEIAWKEVLAGEKAFKQ-TGEWLPQATLDTIDEYLIAIKGPLTTPIGGGIRSLNVALRQELDLYVCLRPVRYFKGVPSPVKRPEDTDMVIFRENTEDIYAGIEFKEGSIESKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKEGRKSLTLVHKGNIMKFTEGAFKNWGYDLCEREYGDKVFTWNEYDRIKEAEGTEVADAKQNEALAAGKILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLTGHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEHIGWGEAAALINQSMEKTI-AAKTVTYDFARLMDGATEVKCSEFADELIKNF
2D1C Chain:B ((21-355))------------------LITVIPGDGIGPECVEATLKVLEAA-------KAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYAG-RGIDLVVVRENVEDLYAGIEHMQTPSVAQTL-----------------------KLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKR-AFEQVAQEYPD---------------------------IEAVHIIVDNAA-----HQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEV--AIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEGRVLTGDVVGYDRGA---KTTEYTEAIIQNL


General information:
TITO was launched using:
RESULT:

Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139685 for 2980 contacts (-46.9/contact) +
2D Compatibility (PS) -35939 + (NN) -9814 + (LL) 5196
1D Compatibility (HY) -24400 + (ID) 6700
Total energy: -211342.0 ( -70.92 by residue)
QMean score : 0.695

(partial model without unconserved sides chains):
PDB file : Tito_2D1C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D1C-query.scw
PDB file : Tito_Scwrl_2D1C.pdb: