Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTITVDGE-KIKEIIDIPDHEIAVQMLLEKLINHKV--IGSYDEITGIGHRVVHGGERFPESVYIDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDVVSVAVFDTAFHQTMPPASYLYSLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVSGISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMNGVDAIIFTAGIGENSSYIREKVLRGLEFMGVYWDPALNQVRGEERFLNYPHSPVKVIIIPTNEELMIARDVETIKNNR |
1G99 Chain:A ((1-398)) | -MKVLVINAGSSSLKYQLIDMTNESALAVGLCERIGIDNSIITQKKFDGKKLEKLTDLPTHKDALEEVVKALTDDEFGVIKDMGEINAVGHRVVHGGEKFTTSALYDEGVEKAIKDCFELAPLHNPPNMMGISACAEIMPGTPMVIVFDTAFHQTMPPYAYMYALPYDLYEKHGVRKYGFHGTSHKYVAERAALMLGKPAEETKIITCHLGNGSSITAVEGGKSVETSMGFTPLEGLAMGTRCGSIDPAIVPFLMEKEGLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNKIRGQEIDISTPDAKVRVFVIPTNEELAIARETKEIVET- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -233408 for 3383 contacts (-69.0/contact) +
2D Compatibility (PS) -43752 + (NN) -20996 + (LL) 308
1D Compatibility (HY) -36800 + (ID) 10550
Total energy: -345198.0 ( -102.04 by residue)
QMean score : 0.630
|
|
|