Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFS-AQAETLATFYPHLKDL------AVSPLEKINPTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFRE--KK-----------ETTFIANPGCYATATLLGLAPLATNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDES---------IPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNA----------PFVRIQPENVYPTVK-QVTASN--YCDIGL-AYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2EP5 Chain:A ((5-347)) | IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTN-YEDHKDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPD-------------------VPLINPEINWEHLELLKFQKERKGWKGILVKNPNCTAAIMSMPIKPLIEIATK--SKIIITTLQAVSGAGYNGI---SFMAIEGNIIPYIKG---EEDKIAKELTKLNGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKSLPQQKNLPTAPKQPIIVRDEEDRPQPIIDVNAESGMAVTVGRIRHE--NNVLRLVVLGDNLVRGAAGITILTVEVMKEL------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153479 for 2562 contacts (-59.9/contact) +
2D Compatibility (PS) -32147 + (NN) -8439 + (LL) 1864
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -208801.0 ( -81.50 by residue)
QMean score : 0.446
|
|
|