Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFL-RKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKL-NQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND
2BB7 Chain:A ((5-254))
---IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDD-
General information:
TITO was launched using:
RESULT:
Template:
2BB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102045 for 2164 contacts (-47.2/contact) +
2D Compatibility (PS) -26708 + (NN) -10561 + (LL) 388
1D Compatibility (HY) -18800 + (ID) 4550
Total energy: -162276.0 ( -74.99 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2BB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BB7-query.scw
PDB file :
Tito_Scwrl_2BB7.pdb
: