Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGEKEFRRLEHEKLKELATTKA--VIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRL--KGDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTD---NRNQQEVAQTILTMLDK
1ZUI Chain:A ((16-167))
MGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIVMH----ENLKGLGTTFYLKMDFETLIKRLNQ--REKRPLLNNLT--QAKELFEKRQALYEKNASFIIDARGGLNNSLKQVLQFI------
General information:
TITO was launched using:
RESULT:
Template:
1ZUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47871 for 1009 contacts (-47.4/contact) +
2D Compatibility (PS) -15369 + (NN) -3297 + (LL) 724
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -80613.0 ( -79.89 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUI-query.scw
PDB file :
Tito_Scwrl_1ZUI.pdb
: