Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRK----VDEDFFEELEEI---LIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
3NG1 Chain:B ((4-282))-------------------------------QLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKD-RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVL------GPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPF------------------


General information:
TITO was launched using:
RESULT:

Template: 3NG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140536 for 2273 contacts (-61.8/contact) +
2D Compatibility (PS) -29764 + (NN) -18416 + (LL) 2672
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -207844.0 ( -91.44 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3NG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NG1-query.scw
PDB file : Tito_Scwrl_3NG1.pdb: