Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAIKVESLTKNYH--KKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDVVKDSAEI----KKMVGYVPSEVRYYPQMTANDIIHYAAKFHHI--ENATQKMNKYYEMFSIDP--KKRFGEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQHYLFKEMTERNKE-GMTIFLSSHNLREVQEYCTRAAFIRNGNIIAV---EDIANQQMTGKVIALKGT-NLPLEKLTNAGARIIEKEMGK-------------ARLIFDDDIKTILPLLQEKEITDLTITNQELEDKFMTLYEGGEIK----------------------------- |
1OXS Chain:C ((1-352)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107630 for 2212 contacts (-48.7/contact) +
2D Compatibility (PS) -30555 + (NN) -1992 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -159577.0 ( -72.14 by residue)
QMean score : 0.346
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