Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKLADYSDKVTFIKANFRDMKEALNERGIEAVDGILYDLGVSSPQLDERERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEK-FSKQIAREIERRREVKPIETTGELVDIIKTAIPAPAR-RKGGHPGKRTFQAIRIAVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK |
1M6Y Chain:A ((8-296)) | -QRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSK------------------KLRILTEKPVRPSEEEIRENPRARSGRLRAAERI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99203 for 2479 contacts (-40.0/contact) +
2D Compatibility (PS) -30995 + (NN) -9448 + (LL) 492
1D Compatibility (HY) -25200 + (ID) 6350
Total energy: -170704.0 ( -68.86 by residue)
QMean score : 0.544
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