Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAKVG-SVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE
2DT5 Chain:A ((2-207))
------KVPEAAISRLITYLRILEELEAQGVHRTSSEQLGGLAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGRPVR-GGVIEHVDLLPQRVP-GRIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAILNPKWRE-
General information:
TITO was launched using:
RESULT:
Template:
2DT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144158 for 1456 contacts (-99.0/contact) +
2D Compatibility (PS) -21674 + (NN) -3363 + (LL) 976
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -188219.0 ( -129.27 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_2DT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DT5-query.scw
PDB file :
Tito_Scwrl_2DT5.pdb
: