Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFTKKRGLML--------------LAAVLL---TVCAIWEYAMPTDAAVKSYYVKVEDAGKPVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKNVPDKIKYLAEK
2JTD Chain:A ((1-122))EEEMKRLLALSQEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFN--------EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEF


General information:
TITO was launched using:
RESULT:

Template: 2JTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 91 for 657 contacts (0.1/contact) +
2D Compatibility (PS) -10771 + (NN) 5056 + (LL) 308
1D Compatibility (HY) 0 + (ID) 1250
Total energy: -6566.0 ( -9.99 by residue)
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_2JTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JTD-query.scw
PDB file : Tito_Scwrl_2JTD.pdb: