Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKP-------------SEEMIADLRGRYHAIGGLSPLAKITEAQAYGLEKALND-SQDEVEFKAYIGLKHIEPFIEDAVEAMHKDGIEEAISIVLAPHYSSFSVEAYNKRAKEAADKL---GGPRINAINDWYKQPKFIQMWADRINETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPNQLQETADFIFEKVVV-PHYALGWQSE-GKTGEPWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYECKV-VTDEVGA-AYHRPPMPNSDPEFLEVLRTVVWEKYSN |
| 3HCN Chain:A ((1-326)) | RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGP--MPWLGPQTDESIKGL-CERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116008 for 2516 contacts (-46.1/contact) +
2D Compatibility (PS) -33228 + (NN) -18589 + (LL) -108
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -189383.0 ( -75.27 by residue)
QMean score : 0.514
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