Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYTITLNPSIDYIVQIDQLNLGGLNRM---KQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEG--VKTGFVTVKDDTRINIKLKH--G-EETEINGLGPA---ISEKEINE-FLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQE---LLDALPNRPILIKPNHHE-LADLFGVKLGSVEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADA-LKGELKNSVGAGDSMIAGFVGTFD-KTRDPVKAFAAGVATGGATAFSTD--LAQKELIDELLPQVKITKITGRN |
| 2AJR Chain:A ((13-330)) | MVLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMTLSK---VDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLERIYEGP-EFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKS-QVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATRRKEKYMPDLEAIKKEYDHFTVERV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148081 for 2586 contacts (-57.3/contact) +
2D Compatibility (PS) -31788 + (NN) -6794 + (LL) 292
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -214571.0 ( -82.97 by residue)
QMean score : 0.512
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