Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
2WBX Chain:A ((1-102))
MQVNRL--PFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN----------------------DPLVFGVSGEEASRF----------FAVEPDTGVVWLRQPL---------DRETKSEFTVEFSVSDHQG-VITRKVNIQVGD---
General information:
TITO was launched using:
RESULT:
Template:
2WBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30631 for 718 contacts (-42.7/contact) +
2D Compatibility (PS) -10885 + (NN) -431 + (LL) 3972
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -44225.0 ( -61.59 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2WBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WBX-query.scw
PDB file :
Tito_Scwrl_2WBX.pdb
: