Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL
2W9M Chain:A ((98-131))
--DLLGVRGLGPKKIRSLWLAGIDSLERLREAA--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2W9M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2456 for 150 contacts (-16.4/contact) +
2D Compatibility (PS) -3352 + (NN) -1770 + (LL) 4292
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -5236.0 ( -34.91 by residue)
QMean score : 0.838
(partial model without unconserved sides chains):
PDB file :
Tito_2W9M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9M-query.scw
PDB file :
Tito_Scwrl_2W9M.pdb
: