Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY--AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1G9T Chain:B ((10-175))
-------EVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASS--------RDLKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLD---
General information:
TITO was launched using:
RESULT:
Template:
1G9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114973 for 1219 contacts (-94.3/contact) +
2D Compatibility (PS) -17107 + (NN) -5162 + (LL) 872
1D Compatibility (HY) -19600 + (ID) 3450
Total energy: -159420.0 ( -130.78 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_1G9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9T-query.scw
PDB file :
Tito_Scwrl_1G9T.pdb
: