Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDK-E----VTKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGK-PDLEYLVNGFAVFNNKDENKVKASKKFIT-FIADDKKWGPKDVIRTGAFPV-RTSFGDLYKGDKR-MMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 3DM0 Chain:A ((3-375)) | ----------------------------------EEGKLVIWING--DK------GYNGLAEVGKKFEKD-TGIKVTVEH--PDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAA--FQDKLYPFTWDAV-RYNGKLIAYPIAVEALSLIYNKDLLPN------PPK--TWEEIPALDKELKAKGKSALM-FNL---QEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADT--DYSIAEAAFNKGETAMTINGPWAWSNIDT-----SAVNYGVTVLPTFKGQPSKPFVGVLSAGINA--ASPNKELAKEFLENYLLTDEGL-EAVNKDKPLGAVALKSYEEELAKDPRIAATMENA-Q-KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAGLVLKGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38394 for 3197 contacts (-12.0/contact) +
2D Compatibility (PS) -38730 + (NN) -16118 + (LL) 4536
1D Compatibility (HY) -8000 + (ID) 3550
Total energy: -100256.0 ( -31.36 by residue)
QMean score : 0.425
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