Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPD--------------AQDLGKSYGIRPS---FIIAQ----AALDSDFGEKILANKYH----NLFGLLAEPGTP-----------SITLNDSSTGKKQEKQFTHYKSW-KYSMYDYLAHIKSGATGKKDSYTIMVSVKNP----------KTLVQKLQDSGF-DNDKKYAKKMTEIID--LYDLTRYDK------------------- |
| 4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVLALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47666 for 1153 contacts (-41.3/contact) +
2D Compatibility (PS) -19995 + (NN) -5306 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 1600
Total energy: -86167.0 ( -74.73 by residue)
QMean score : 0.342
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