Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYR-SQDLAKAILPSLDN---LERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN---------- |
| 3D5L Chain:A ((3-205)) | LAKISKIEAQKRKGRYNIYLDG-KYAFPVAESVLIQFRLMKGTELDEKQIAAIATADQQAKAYSRMLDYLSYQMRTESDIVKKLKEIDTPEEFVEPILKKLRGQQLIDDHAYAASYVRTMINTDLKGPGIIRQHLRQKGIGESDIDDALTQFTPEVQAELAKKLALKLFRRYRNQPERRREQKVQQGLTTKGFSSSVYEMIKDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44779 for 1268 contacts (35.3/contact) +
2D Compatibility (PS) -20178 + (NN) -826 + (LL) 176
1D Compatibility (HY) 1200 + (ID) 1300
Total energy: 23851.0 ( 18.81 by residue)
QMean score : 0.155
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