Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGEEALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSMEKGQDWKLTAEVVTKPEVKLGDYKDLSVEVDA-SKEVSAEEVDAKVERERNNLAE--------------LTVKDGE-AAQGDTVVIDFVGSV-DGVEFDGGKG--DNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDL-----AGKDAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSADMLKHDIAMKKAVDVITSSATVK |
| 3UF8 Chain:A ((64-209)) | -----------------------------------------------------------------------------------------------------------------------LYDGIRIQADQTP-EDLDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11148 for 774 contacts (-14.4/contact) +
2D Compatibility (PS) -12813 + (NN) 5 + (LL) 24260
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -6196.0 ( -8.01 by residue)
QMean score : 0.434
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