Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLD--SKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIV-LCKGRISVSSQFEIGTEFCVELPLS |
| 3A0Y Chain:A ((607-751)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSED-MYTKVRVSVWNSGPPIPEELKEKIFSPFFTTK------GTGLGLSICRKIIEDEHGGKIWTENR-ENGVVFIFEIPKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103051 for 1058 contacts (-97.4/contact) +
2D Compatibility (PS) -15208 + (NN) -6898 + (LL) 19144
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -117113.0 ( -110.69 by residue)
QMean score : 0.549
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