Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIVS---AEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGG--YKLC-------KQLIETLVESMGITVPVAIHLDHG-HYDD--------------ALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAM-VET-----GIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEA----------VPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEA-----EYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
3ELF Chain:A ((2-341)) | -PIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVI--AAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGG----------YTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTN-YDGVLKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ELF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97361 for 2330 contacts (-41.8/contact) +
2D Compatibility (PS) -31874 + (NN) -23573 + (LL) 604
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -167204.0 ( -71.76 by residue)
QMean score : 0.580
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