Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIGIIIASHGKFAEGIHQSGSMIFGEQEKVQVVTFMPNEGPDDLYGHFNNAIAQFDADDEVLVLADLWSGSPFNQASRVMGENPERKMAIITGLNLPMLIQAYTERMMDANAGVEQVAANIIKESKEGIKALPEELNPVVEATPVAGVPADVPAEVKQSGSIPEGTVIGDGKLKINLARIDTRLLHGQVATAWTPASKANRIIVASDEVSKDELRKQLIKQAAPGGVKANVVPISKLIEVAKDPRFGNTRALILFETVQDALRAIEGGVEIPELNVGSMAHSTGKTMVNNVLSMDKDDVAAFEKLR-DLGVSFDVRKVPNDAKKNLFDLINKANVK |
3P3V Chain:A ((5-161)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNIIMTRVDERLIHGQ-GQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKAS-PAQSIFIVVKDLQDAKLLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAHDHHVVFNTKTTPAGNSASDVDILDYI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82074 for 1244 contacts (-66.0/contact) +
2D Compatibility (PS) -16774 + (NN) -6098 + (LL) 10900
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -109896.0 ( -88.34 by residue)
QMean score : 0.597
|
|
|