Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKG--MIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQ-DLASKISQKLY-KKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4TQT Chain:A ((14-490)) | ASKVIKGGTVITADRTFRADILIEDGKIAAIGDSLEGDEVIDASGCYVMPGGIDPHTHLQMPFMGTYSSDDFDTGTAAALAGGTTMVVDFVLPDSEGNLLDALQEWFQKAGKARTDYSFHMAITGWNERTFNEMAEVVKRGI------NTFHFMAYKGALMVNDDEMFASFQRCAELGA---MPLVHA------------------ENGDIVAQLQAKLMAE-------------------GNDGPEAHAY--------SRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMRVFG-EPLIQHLTLDESEYH--------------NRDWDYAAR---------RVMSPPFRDKLNQDSLWAGLAAGSLQCVATDHCAFTTEQKRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLTPNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKISAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFDKGQVTAKPGDGRFIEREPNGAVNRALSQWKEIVAPRKVERSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2 for 1384 contacts (-0.0/contact) +
2D Compatibility (PS) -18663 + (NN) 592 + (LL) 6060
1D Compatibility (HY) -1600 + (ID) 1850
Total energy: -15463.0 ( -11.17 by residue)
QMean score : 0.209
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