Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWM---INNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIK----ESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSP---QPWKEWRETDKHFDQGNL
3UWE Chain:A ((10-131))
------LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP---LSPTDENGKVIFD
General information:
TITO was launched using:
RESULT:
Template:
3UWE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35507 for 740 contacts (-48.0/contact) +
2D Compatibility (PS) -11311 + (NN) 282 + (LL) 972
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -56964.0 ( -76.98 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3UWE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWE-query.scw
PDB file :
Tito_Scwrl_3UWE.pdb
: