Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQD----KFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV------------------------------------------------------------ |
| 1YFU Chain:A ((1-174)) | MLTYGAPFNFPRWIDEHAHLLKPP---VGNRQVWQDSDFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQRPAGMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYASEDKRRCPHCGQVHPGRAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40857 for 714 contacts (-57.2/contact) +
2D Compatibility (PS) -11175 + (NN) 1203 + (LL) 432
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -54097.0 ( -75.77 by residue)
QMean score : 0.419
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