Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MRVYENKEELKKEISKTFEKYIMEFNNIPENLKDKRIDEVDRTPAENLSYQVGWTNLVLKWEEDERKGLQVKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNENINSIYAM-IDLLSEEELFEAHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL
4N6C Chain:A ((2-183))
GHHHHHHSHMLRTYENKEELKAEIEKTFEKYILEFDNIPENLKDKRADEVDRTPAENLAYQVGWTNLVLKWEEDERKGLQVKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNENINSIS-AMIDSLSEEELFEPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL
General information:
TITO was launched using:
RESULT:
Template:
4N6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21568 for 1257 contacts (-17.2/contact) +
2D Compatibility (PS) -17737 + (NN) -4948 + (LL) 144
1D Compatibility (HY) -20400 + (ID) 7950
Total energy: -72459.0 ( -57.64 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4N6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N6C-query.scw
PDB file :
Tito_Scwrl_4N6C.pdb
: