Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDYE-YIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAFP-TDYYRALIPSDVVVAQKPGYV-REALNVGAIVK-EE--VPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 3LEZ Chain:A ((3-257)) | -------------------------------------------------------------------------------------------------EDLKKLEEEF---DVRLGVYAIDTGADKEISYRENERFAYTSTFKPLAVGAVLQTKS--DEELEETITYSEEDLVTYSPITE-QH-V-DEGMTLVEIADAAIRYSDNTAGNLLLEAMGGPDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQYVLEDVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDADYDDKL----IEKATEIVLQELRN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111584 for 2037 contacts (-54.8/contact) +
2D Compatibility (PS) -24289 + (NN) 3713 + (LL) 9456
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: -128654.0 ( -63.16 by residue)
QMean score : 0.353
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