Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGYTVAIVGATGAVGTQMIRQLEQSNLPIEQVKLLSSSRSAGKILHFKDEAIRVEETTKESFYDVDIALFSAGGSISAKFAPYAVKSGAVVVDNTSYFRQNPDVPLVVPEVN----AHAMIGHNGIIACPNCSTIQMMIALEPIRQKWGIERVIVSTYQAVSGSGARAVEETKEQLRQVLNDNLSPDQLI----ATVLPCSSDQKHYPIAFNALPQIDIFTDNDY--TYEEMKMTLETKKIMEDATIKVSATCVRIPVLSGHSESIYIETKELASISEIKKAIANFPGAVLQDLPSQQIYPQAINAVGHRETFVGRIRKD--LDQENGVHMWVVSDNLLKGAAWNSVQIAETLHKNGLVKPAKELKFELI |
3VOS Chain:A ((19-359)) | -GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASAR----KLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRR--PKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIG---GAEQLVYDGGALEFP-PPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVDVPTP------LAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLT---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159428 for 2861 contacts (-55.7/contact) +
2D Compatibility (PS) -35060 + (NN) -14207 + (LL) 2136
1D Compatibility (HY) -18800 + (ID) 6800
Total energy: -232159.0 ( -81.15 by residue)
QMean score : 0.502
|
|
|